QUESTION 10 points Save Answer Given the following alignment in context of motif

Question

QUESTION 10 points Save Answer Given the following alignment in context of motif finding problem, what is the consensus sequence? cggtacct ccatacgt ccattagt acatgcct ccatacgg ccataogt ecttacgt ccatacg caataogt QUESTION 2 10 points Save Answer Instead of four bases, let's assume that 6 bases are needed for constructing DNA. In this case, how many leaf nodes will be there in the tree that stores all possible 2-mers ? 64 16 QUESTION 3 10 points Save Answer Given DNA as the following two sequences in the context of Median String Finding Problem, ccatacg ccattag Which of the following 4-mer has the lowest value of TotalDistance(v,DNA) ? QUESTION 4 10 points Save Answer which of the 16 possible 2-mers has the highest value of totalDistance(v,DNA) from the DNA sequence ? cetgatagacgctatetggctatcc gc

Explanation / Answer

1) CCATTAGT is the motif alignment of the consesus sequence

2)36 if there is 6bases pair then the possible 2-mers

3)CCATTAG The sequence of the alignment

CCAa

4)GC

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